
| Pos | Name | Fahrer | Team | Team | Zeit | Zeit | |
|---|---|---|---|---|---|---|---|
| 1 | Á. Rins | Álex Rins | Estrella Gal. | Estrella Galicia 0'0 | 2:09.387m | 2:09.387m | |
| 2 | M. Viñales | Maverick Viñales | Team Calvo | Team Calvo | 2:10.310m | +0.923s | |
| 3 | Á. Márquez | Álex Márquez | Estrella Gal. | Estrella Galicia 0'0 | 2:10.313m | +0.926s | |
| 4 | L. Salom | Luis Salom | RB KTM Ajo | Red Bull KTM Ajo | 2:10.656m | +1.269s | |
| 5 | J. Miller | Jack Miller | Caretta RTG | Caretta Technology - RTG | 2:10.671m | +1.284s | |
| 6 | I. Viñales | Isaac Viñales | B-O-C Seta | Bimbo-Ongetta-Centro Seta | 2:10.881m | +1.494s | |
| 7 | N. Antonelli | Niccolò Antonelli | GO&FUN Gresini | GO&FUN Gresini Moto3 | 2:11.011m | +1.624s | |
| 8 | H. Ono | Hiroki Ono | Honda Team Asia | Honda Team Asia | 2:11.057m | +1.670s | |
| 9 | J. Folger | Jonas Folger | Aspar Team | CFMOTO Aspar Team | 2:11.223m | +1.836s | |
| 10 | S. Yamada | Sena Yamada | Team Plus One | Team Plus One | 2:11.518m | +2.131s | |
| 11 | J. Iwema | Jasper Iwema | RW Racing GP | RW Racing GP | 2:11.644m | +2.257s | |
| 12 | H. Watanabe | Hyuga Watanabe | LF Tascaracing | La Fonte Tascaracing | 2:11.719m | +2.332s | |
| 13 | Z. Khairuddin | Zulfahmi Khairuddin | RB KTM Ajo | Red Bull KTM Ajo | 2:11.793m | +2.406s | |
| 14 | T. Finsterbusch | Toni Finsterbusch | Kiefer Racing | Kiefer Racing | 2:11.954m | +2.567s | |
| 15 | B. Binder | Brad Binder | Ambrogio Racing | Ambrogio Racing | 2:11.973m | +2.586s | |
| 16 | J. Kornfeil | Jakub Kornfeil | Redox RW | Redox RW Racing GP | 2:12.090m | +2.703s | |
| 17 | N. Ajo | Niklas Ajo | Avant Tecno | Avant Tecno | 2:12.236m | +2.849s | |
| 18 | M. Oliveira | Miguel Oliveira | Mahindra Racing | Mahindra Racing | 2:12.287m | +2.900s | |
| 19 | A. Sissis | Arthur Sissis | RB KTM Ajo | Red Bull KTM Ajo | 2:12.335m | +2.948s | |
| 20 | A. Masbou | Alexis Masbou | Ongetta-Ricavol | Ongetta-Ricavold | 2:12.375m | +2.988s | |
| 21 | E. Vázquez | Efrén Vázquez | Mahindra Racing | Mahindra Racing | 2:12.382m | +2.995s | |
| 22 | J. McPhee | John McPhee | Caretta RTG | Caretta Technology - RTG | 2:12.468m | +3.081s | |
| 23 | Kiefer Racing | Kiefer Racing | 2:12.545m | +3.158s | |||
| 24 | L. Baldassarri | Lorenzo Baldassarri | GO&FUN Gresini | GO&FUN Gresini Moto3 | 2:12.577m | +3.190s | |
| 25 | L. Loi | Livio Loi | Marc VDS Racing | Marc VDS Racing Team | 2:12.595m | +3.208s | |
| 26 | R. Fenati | Romano Fenati | San Carlo Team | San Carlo Team Italia | 2:13.193m | +3.806s | |
| 27 | A. Techer | Alan Techer | CIP-Green | CIP Green Power | 2:13.899m | +4.512s | |
| 28 | LF Tascaracing | La Fonte Tascaracing | 2:14.007m | +4.620s | |||
| 29 | Ambrogio Racing | Ambrogio Racing | 2:14.017m | +4.630s | |||
| 30 | M. Ferrari | Matteo Ferrari | Ongetta-Centro | Ongetta-Centro Seta | 2:14.179m | +4.792s | |
| 31 | E. Granado | Eric Granado | Aspar Team | CFMOTO Aspar Team | 2:14.706m | +5.319s | |
| 32 | P. Öttl | Philipp Öttl | Paddock Motion | Paddock TT Motion | 2:16.664m | +7.277s | |
| 33 | J. Guevara | Juanfran Guevara | CIP-Green | CIP Green Power | 2:17.438m | +8.051s | |
| 34 | F. Bagnaia | Francesco Bagnaia | San Carlo Team | San Carlo Team Italia | 2:18.066m | +8.679s | |
| 35 | A. Carrasco | Ana Carrasco | Team Calvo | Team Calvo | DNF | DNF |
| Aragon GP | 27.09. - 29.09. | |
| Sepang | 11.10. - 13.10. | |
| Phillip Island | 18.10. - 20.10. | |
| Japan GP | 25.10. - 27.10. | |
| Valencia | 08.11. - 10.11. |