
| Pos | Name | Fahrer | Team | Team | Zeit | Zeit | |
|---|---|---|---|---|---|---|---|
| 1 | J. Folger | Jonas Folger | Aspar Team | CFMOTO Aspar Team | 1:42.707m | 1:42.707m | |
| 2 | Á. Rins | Álex Rins | Estrella Gal. | Estrella Galicia 0'0 | 1:42.768m | +0.061s | |
| 3 | M. Viñales | Maverick Viñales | Team Calvo | Team Calvo | 1:43.171m | +0.464s | |
| 4 | Z. Khairuddin | Zulfahmi Khairuddin | RB KTM Ajo | Red Bull KTM Ajo | 1:43.657m | +0.950s | |
| 5 | N. Antonelli | Niccolò Antonelli | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:43.727m | +1.020s | |
| 6 | M. Oliveira | Miguel Oliveira | Mahindra Racing | Mahindra Racing | 1:43.794m | +1.087s | |
| 7 | E. Granado | Eric Granado | Aspar Team | CFMOTO Aspar Team | 1:43.843m | +1.136s | |
| 8 | I. Viñales | Isaac Viñales | B-O-C Seta | Bimbo-Ongetta-Centro Seta | 1:43.878m | +1.171s | |
| 9 | Á. Márquez | Álex Márquez | Estrella Gal. | Estrella Galicia 0'0 | 1:43.953m | +1.246s | |
| 10 | L. Salom | Luis Salom | RB KTM Ajo | Red Bull KTM Ajo | 1:43.960m | +1.253s | |
| 11 | J. Miller | Jack Miller | Caretta RTG | Caretta Technology - RTG | 1:43.962m | +1.255s | |
| 12 | A. Masbou | Alexis Masbou | Ongetta-Ricavol | Ongetta-Ricavold | 1:43.971m | +1.264s | |
| 13 | P. Öttl | Philipp Öttl | Paddock Motion | Paddock TT Motion | 1:44.051m | +1.344s | |
| 14 | E. Vázquez | Efrén Vázquez | Mahindra Racing | Mahindra Racing | 1:44.081m | +1.374s | |
| 15 | R. Fenati | Romano Fenati | San Carlo Team | San Carlo Team Italia | 1:44.153m | +1.446s | |
| 16 | J. Kornfeil | Jakub Kornfeil | Redox RW | Redox RW Racing GP | 1:44.303m | +1.596s | |
| 17 | J. McPhee | John McPhee | Caretta RTG | Caretta Technology - RTG | 1:44.327m | +1.620s | |
| 18 | A. Sissis | Arthur Sissis | RB KTM Ajo | Red Bull KTM Ajo | 1:44.405m | +1.698s | |
| 19 | A. Techer | Alan Techer | CIP-Green | CIP Green Power | 1:44.448m | +1.741s | |
| 20 | A. Tonucci | Alessandro Tonucci | LF Tascaracing | La Fonte Tascaracing | 1:44.550m | +1.843s | |
| 21 | N. Ajo | Niklas Ajo | Avant Tecno | Avant Tecno | 1:44.609m | +1.902s | |
| 22 | T. Finsterbusch | Toni Finsterbusch | Kiefer Racing | Kiefer Racing | 1:44.654m | +1.947s | |
| 23 | L. Loi | Livio Loi | Marc VDS Racing | Marc VDS Racing Team | 1:44.732m | +2.025s | |
| 24 | B. Binder | Brad Binder | Ambrogio Racing | Ambrogio Racing | 1:44.734m | +2.027s | |
| 25 | M. Ferrari | Matteo Ferrari | Ongetta-Centro | Ongetta-Centro Seta | 1:44.741m | +2.034s | |
| 26 | A. Locatelli | Andrea Locatelli | Mahindra Racing | Mahindra Racing | 1:44.756m | +2.049s | |
| 27 | L. Baldassarri | Lorenzo Baldassarri | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:44.808m | +2.101s | |
| 28 | A. Carrasco | Ana Carrasco | Team Calvo | Team Calvo | 1:44.902m | +2.195s | |
| 29 | L. Marini | Luca Marini | Twelve Racing | Twelve Racing | 1:45.065m | +2.358s | |
| 30 | J. Guevara | Juanfran Guevara | CIP-Green | CIP Green Power | 1:45.157m | +2.450s | |
| 31 | F. Bagnaia | Francesco Bagnaia | San Carlo Team | San Carlo Team Italia | 1:45.167m | +2.460s | |
| 32 | H. Watanabe | Hyuga Watanabe | LF Tascaracing | La Fonte Tascaracing | 1:45.212m | +2.505s | |
| 33 | J. Iwema | Jasper Iwema | RW Racing GP | RW Racing GP | 1:45.300m | +2.593s | |
| 34 | F. Alt | Florian Alt | Kiefer Racing | Kiefer Racing | 1:45.439m | +2.732s | |
| 35 | Ambrogio Racing | Ambrogio Racing | 1:46.031m | +3.324s |
| Aragon GP | 27.09. - 29.09. | |
| Sepang | 11.10. - 13.10. | |
| Phillip Island | 18.10. - 20.10. | |
| Japan GP | 25.10. - 27.10. | |
| Valencia | 08.11. - 10.11. |