
| Pos | Name | Fahrer | Team | Team | Zeit | Zeit | |
|---|---|---|---|---|---|---|---|
| 1 | M. Viñales | Maverick Viñales | Team Calvo | Team Calvo | 1:44.311m | 1:44.311m | |
| 2 | E. Vázquez | Efrén Vázquez | Mahindra Racing | Mahindra Racing | 1:44.539m | +0.228s | |
| 3 | J. Folger | Jonas Folger | Aspar Team | CFMOTO Aspar Team | 1:44.570m | +0.259s | |
| 4 | Á. Rins | Álex Rins | Estrella Gal. | Estrella Galicia 0'0 | 1:44.641m | +0.330s | |
| 5 | Á. Márquez | Álex Márquez | Estrella Gal. | Estrella Galicia 0'0 | 1:44.688m | +0.377s | |
| 6 | M. Oliveira | Miguel Oliveira | Mahindra Racing | Mahindra Racing | 1:44.705m | +0.394s | |
| 7 | L. Salom | Luis Salom | RB KTM Ajo | Red Bull KTM Ajo | 1:44.778m | +0.467s | |
| 8 | N. Antonelli | Niccolò Antonelli | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:45.008m | +0.697s | |
| 9 | J. Miller | Jack Miller | Caretta RTG | Caretta Technology - RTG | 1:45.270m | +0.959s | |
| 10 | I. Viñales | Isaac Viñales | B-O-C Seta | Bimbo-Ongetta-Centro Seta | 1:45.287m | +0.976s | |
| 11 | P. Öttl | Philipp Öttl | Paddock Motion | Paddock TT Motion | 1:45.297m | +0.986s | |
| 12 | A. Sissis | Arthur Sissis | RB KTM Ajo | Red Bull KTM Ajo | 1:45.361m | +1.050s | |
| 13 | J. Kornfeil | Jakub Kornfeil | Redox RW | Redox RW Racing GP | 1:45.409m | +1.098s | |
| 14 | Z. Khairuddin | Zulfahmi Khairuddin | RB KTM Ajo | Red Bull KTM Ajo | 1:45.506m | +1.195s | |
| 15 | R. Fenati | Romano Fenati | San Carlo Team | San Carlo Team Italia | 1:45.565m | +1.254s | |
| 16 | Ambrogio Racing | Ambrogio Racing | 1:45.629m | +1.318s | |||
| 17 | A. Techer | Alan Techer | CIP-Green | CIP Green Power | 1:45.814m | +1.503s | |
| 18 | M. Ferrari | Matteo Ferrari | Ongetta-Centro | Ongetta-Centro Seta | 1:45.873m | +1.562s | |
| 19 | B. Binder | Brad Binder | Ambrogio Racing | Ambrogio Racing | 1:45.907m | +1.596s | |
| 20 | E. Granado | Eric Granado | Aspar Team | CFMOTO Aspar Team | 1:45.990m | +1.679s | |
| 21 | L. Marini | Luca Marini | Twelve Racing | Twelve Racing | 1:46.045m | +1.734s | |
| 22 | A. Masbou | Alexis Masbou | Ongetta-Ricavol | Ongetta-Ricavold | 1:46.122m | +1.811s | |
| 23 | L. Baldassarri | Lorenzo Baldassarri | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:46.130m | +1.819s | |
| 24 | N. Ajo | Niklas Ajo | Avant Tecno | Avant Tecno | 1:46.224m | +1.913s | |
| 25 | L. Loi | Livio Loi | Marc VDS Racing | Marc VDS Racing Team | 1:46.427m | +2.116s | |
| 26 | J. McPhee | John McPhee | Caretta RTG | Caretta Technology - RTG | 1:46.440m | +2.129s | |
| 27 | A. Locatelli | Andrea Locatelli | Mahindra Racing | Mahindra Racing | 1:46.481m | +2.170s | |
| 28 | J. Iwema | Jasper Iwema | RW Racing GP | RW Racing GP | 1:46.684m | +2.373s | |
| 29 | A. Tonucci | Alessandro Tonucci | LF Tascaracing | La Fonte Tascaracing | 1:46.717m | +2.406s | |
| 30 | A. Carrasco | Ana Carrasco | Team Calvo | Team Calvo | 1:47.068m | +2.757s | |
| 31 | T. Finsterbusch | Toni Finsterbusch | Kiefer Racing | Kiefer Racing | 1:47.163m | +2.852s | |
| 32 | J. Guevara | Juanfran Guevara | CIP-Green | CIP Green Power | 1:47.199m | +2.888s | |
| 33 | F. Alt | Florian Alt | Kiefer Racing | Kiefer Racing | 1:47.428m | +3.117s | |
| 34 | F. Bagnaia | Francesco Bagnaia | San Carlo Team | San Carlo Team Italia | 1:47.799m | +3.488s | |
| 35 | H. Watanabe | Hyuga Watanabe | LF Tascaracing | La Fonte Tascaracing | 1:48.007m | +3.696s |
| Aragon GP | 27.09. - 29.09. | |
| Sepang | 11.10. - 13.10. | |
| Phillip Island | 18.10. - 20.10. | |
| Japan GP | 25.10. - 27.10. | |
| Valencia | 08.11. - 10.11. |