
| Pos | Name | Fahrer | Team | Team | Zeit | Zeit | |
|---|---|---|---|---|---|---|---|
| 1 | Á. Rins | Álex Rins | Estrella Gal. | Estrella Galicia 0'0 | 1:56.783m | 1:56.783m | |
| 2 | M. Viñales | Maverick Viñales | Team Calvo | Team Calvo | 1:57.134m | +0.351s | |
| 3 | Á. Márquez | Álex Márquez | Estrella Gal. | Estrella Galicia 0'0 | 1:57.395m | +0.612s | |
| 4 | L. Salom | Luis Salom | RB KTM Ajo | Red Bull KTM Ajo | 1:57.512m | +0.729s | |
| 5 | J. Folger | Jonas Folger | Aspar Team | CFMOTO Aspar Team | 1:57.652m | +0.869s | |
| 6 | J. Kornfeil | Jakub Kornfeil | Redox RW | Redox RW Racing GP | 1:57.782m | +0.999s | |
| 7 | T. Finsterbusch | Toni Finsterbusch | Kiefer Racing | Kiefer Racing | 1:57.877m | +1.094s | |
| 8 | B. Binder | Brad Binder | Ambrogio Racing | Ambrogio Racing | 1:58.028m | +1.245s | |
| 9 | A. Sissis | Arthur Sissis | RB KTM Ajo | Red Bull KTM Ajo | 1:58.355m | +1.572s | |
| 10 | J. Miller | Jack Miller | Caretta RTG | Caretta Technology - RTG | 1:58.387m | +1.604s | |
| 11 | M. Oliveira | Miguel Oliveira | Mahindra Racing | Mahindra Racing | 1:59.222m | +2.439s | |
| 12 | A. Masbou | Alexis Masbou | Ongetta-Ricavol | Ongetta-Ricavold | 1:59.311m | +2.528s | |
| 13 | N. Antonelli | Niccolò Antonelli | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:59.406m | +2.623s | |
| 14 | J. Iwema | Jasper Iwema | RW Racing GP | RW Racing GP | 1:59.430m | +2.647s | |
| 15 | L. Baldassarri | Lorenzo Baldassarri | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:59.624m | +2.841s | |
| 16 | R. Fenati | Romano Fenati | San Carlo Team | San Carlo Team Italia | 2:00.085m | +3.302s | |
| 17 | E. Granado | Eric Granado | Aspar Team | CFMOTO Aspar Team | 2:00.230m | +3.447s | |
| 18 | A. Tonucci | Alessandro Tonucci | LF Tascaracing | La Fonte Tascaracing | 2:00.298m | +3.515s | |
| 19 | B. Schouten | Bryan Schouten | Dutch Racing | Dutch Racing Team | 2:00.551m | +3.768s | |
| 20 | D. Webb | Daniel Webb | Ambrogio Racing | Ambrogio Racing | 2:00.682m | +3.899s | |
| 21 | I. Viñales | Isaac Viñales | B-O-C Seta | Bimbo-Ongetta-Centro Seta | 2:00.872m | +4.089s | |
| 22 | J. Guevara | Juanfran Guevara | CIP-Green | CIP Green Power | 2:00.915m | +4.132s | |
| 23 | P. Öttl | Philipp Öttl | Paddock Motion | Paddock TT Motion | 2:00.971m | +4.188s | |
| 24 | L. Loi | Livio Loi | Marc VDS Racing | Marc VDS Racing Team | 2:01.109m | +4.326s | |
| 25 | J. McPhee | John McPhee | Caretta RTG | Caretta Technology - RTG | 2:01.130m | +4.347s | |
| 26 | Z. Khairuddin | Zulfahmi Khairuddin | RB KTM Ajo | Red Bull KTM Ajo | 2:01.142m | +4.359s | |
| 27 | E. Vázquez | Efrén Vázquez | Mahindra Racing | Mahindra Racing | 2:01.192m | +4.409s | |
| 28 | M. Ferrari | Matteo Ferrari | Ongetta-Centro | Ongetta-Centro Seta | 2:01.242m | +4.459s | |
| 29 | F. Alt | Florian Alt | Kiefer Racing | Kiefer Racing | 2:01.487m | +4.704s | |
| 30 | H. Watanabe | Hyuga Watanabe | LF Tascaracing | La Fonte Tascaracing | 2:01.983m | +5.200s | |
| 31 | N. Ajo | Niklas Ajo | Avant Tecno | Avant Tecno | 2:02.937m | +6.154s | |
| 32 | A. Carrasco | Ana Carrasco | Team Calvo | Team Calvo | 2:03.147m | +6.364s | |
| 33 | A. Techer | Alan Techer | CIP-Green | CIP Green Power | 2:03.611m | +6.828s | |
| 34 | F. Bagnaia | Francesco Bagnaia | San Carlo Team | San Carlo Team Italia | 2:04.263m | +7.480s | |
| 35 | T. van Leeuwen | Thomas van Leeuwen | RT v. Leeuwen | Racing Team van Leeuwen | 2:04.825m | +8.042s |
| Aragon GP | 27.09. - 29.09. | |
| Sepang | 11.10. - 13.10. | |
| Phillip Island | 18.10. - 20.10. | |
| Japan GP | 25.10. - 27.10. | |
| Valencia | 08.11. - 10.11. |