
| Pos | Name | Fahrer | Team | Team | Zeit | Zeit | |
|---|---|---|---|---|---|---|---|
| 1 | Á. Rins | Álex Rins | Estrella Gal. | Estrella Galicia 0'0 | 1:46.660m | 1:46.660m | |
| 2 | M. Viñales | Maverick Viñales | Team Calvo | Team Calvo | 1:47.145m | +0.485s | |
| 3 | L. Salom | Luis Salom | RB KTM Ajo | Red Bull KTM Ajo | 1:47.327m | +0.667s | |
| 4 | B. Binder | Brad Binder | Ambrogio Racing | Ambrogio Racing | 1:47.517m | +0.857s | |
| 5 | J. Miller | Jack Miller | Caretta RTG | Caretta Technology - RTG | 1:47.613m | +0.953s | |
| 6 | N. Antonelli | Niccolò Antonelli | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:47.742m | +1.082s | |
| 7 | J. Folger | Jonas Folger | Aspar Team | CFMOTO Aspar Team | 1:47.793m | +1.133s | |
| 8 | N. Ajo | Niklas Ajo | Avant Tecno | Avant Tecno | 1:47.868m | +1.208s | |
| 9 | J. Kornfeil | Jakub Kornfeil | Redox RW | Redox RW Racing GP | 1:48.009m | +1.349s | |
| 10 | E. Vázquez | Efrén Vázquez | Mahindra Racing | Mahindra Racing | 1:48.147m | +1.487s | |
| 11 | Z. Khairuddin | Zulfahmi Khairuddin | RB KTM Ajo | Red Bull KTM Ajo | 1:48.262m | +1.602s | |
| 12 | D. Webb | Daniel Webb | Ambrogio Racing | Ambrogio Racing | 1:48.359m | +1.699s | |
| 13 | A. Masbou | Alexis Masbou | Ongetta-Ricavol | Ongetta-Ricavold | 1:48.413m | +1.753s | |
| 14 | A. Sissis | Arthur Sissis | RB KTM Ajo | Red Bull KTM Ajo | 1:48.481m | +1.821s | |
| 15 | M. Oliveira | Miguel Oliveira | Mahindra Racing | Mahindra Racing | 1:48.498m | +1.838s | |
| 16 | I. Viñales | Isaac Viñales | B-O-C Seta | Bimbo-Ongetta-Centro Seta | 1:48.502m | +1.842s | |
| 17 | J. McPhee | John McPhee | Caretta RTG | Caretta Technology - RTG | 1:48.559m | +1.899s | |
| 18 | R. Fenati | Romano Fenati | San Carlo Team | San Carlo Team Italia | 1:48.618m | +1.958s | |
| 19 | J. Iwema | Jasper Iwema | RW Racing GP | RW Racing GP | 1:48.715m | +2.055s | |
| 20 | E. Granado | Eric Granado | Aspar Team | CFMOTO Aspar Team | 1:48.731m | +2.071s | |
| 22 | Á. Márquez | Álex Márquez | Estrella Gal. | Estrella Galicia 0'0 | 1:48.994m | +2.334s | |
| 23 | F. Bagnaia | Francesco Bagnaia | San Carlo Team | San Carlo Team Italia | 1:49.072m | +2.412s | |
| 24 | A. Carrasco | Ana Carrasco | Team Calvo | Team Calvo | 1:49.092m | +2.432s | |
| 26 | F. Alt | Florian Alt | Kiefer Racing | Kiefer Racing | 1:49.266m | +2.606s | |
| 27 | A. Tonucci | Alessandro Tonucci | LF Tascaracing | La Fonte Tascaracing | 1:49.432m | +2.772s | |
| 28 | T. Finsterbusch | Toni Finsterbusch | Kiefer Racing | Kiefer Racing | 1:49.435m | +2.775s | |
| 29 | J. Guevara | Juanfran Guevara | CIP-Green | CIP Green Power | 1:49.561m | +2.901s | |
| 30 | P. Öttl | Philipp Öttl | Paddock Motion | Paddock TT Motion | 1:49.664m | +3.004s | |
| 31 | A. Techer | Alan Techer | CIP-Green | CIP Green Power | 1:49.743m | +3.083s | |
| 32 | M. Ferrari | Matteo Ferrari | Ongetta-Centro | Ongetta-Centro Seta | 1:49.761m | +3.101s | |
| 33 | H. Watanabe | Hyuga Watanabe | LF Tascaracing | La Fonte Tascaracing | 1:50.086m | +3.426s | |
| 34 | L. Baldassarri | Lorenzo Baldassarri | GO&FUN Gresini | GO&FUN Gresini Moto3 | 1:50.293m | +3.633s |
| Aragon GP | 27.09. - 29.09. | |
| Sepang | 11.10. - 13.10. | |
| Phillip Island | 18.10. - 20.10. | |
| Japan GP | 25.10. - 27.10. | |
| Valencia | 08.11. - 10.11. |